medical-terminology

There are 2 repositories under medical-terminology topic.

• clinical_informatics_umls

  rcolinp / clinical_informatics_umls

  An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being a free UMLS license holder. This repo will subset 2021AB UMLS native release, introduce/build upon UMLS provided tools to load a configured subset into first a relational database --> MySQL, SQLite, PostgreSQL and MariaDB all covered within this repo. Next the UMLS subset which is stored in a relational DB will be queried, modeled and lastly loaded into a defined Neo4j label property graph. Lastly, Neo4j database containing UMLS 2021AB subset in schema promoting intuitive analysis and rich visualization will become the central datastore for analysis. The datastore contains ~5 million distinct nodes & >40 million distinct relationships (edges). Currently, Neo4j is running via Docker but deployment options are NOT limited to Docker. If choosing to deploy via Neo4j Aura, server, Neo4j Desktop, VM etc... Please note and be aware of the specific volumes and environment variables specified within this repository (docker run). The ability for the loaded Neo4j Graph to interact with RDF data (i.e. import/export RDF data to and from Neo4j) may not be possible via all Neo4j deployment avenues (i.e. Neo4j Aura currently does not support RDF integration that is demonstrated in this repository).

  medical-terminologyneo4jpythonpy2neoneosemanticsrdfontologyknowledge-graphgraph-databasesemantic-webumlsbiomedical-informaticsinteroperabilitybiomedical-ontologies
  Language:Python 38

• bytecell / slotminer

  Tool for slot extraction from text

  slot-extractiondialog-systeminformation-extractionrule-basedslotminerslot-mininingtemporal-informationtime-informationslot-normalizationslot-fillingnatural-language-processingnatural-language-understandingnamed-entity-recognitionnamed-entitynamed-entity-extractionkorean-text-processingmedical-terminologyclinical-terminology
  Language:Python 16

• dhchenx / umls-similarity

  Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)

  unified-medical-language-systemumlsmedical-terminologymedical-conceptsemantic-similarityumls-similarityumls-metathesaurus
  Language:Perl 16

• AberystwythSystemsBiology / MEDIALpy

  A small python package that allows the user to look up common medical abbreviations.

  medical-terminologymedical-informationmedical-abbreviationsterminologymedical-glossaryglossarymedicine
  Language:Python 12

• cornish / pubmed-eponyms

  Python scripts for searching Pubmed using Biopython and working with eponymous terms

  pubmedmedlinebiopythonentrezncbieponymmedicineliterature-searchmedical-terminology
  Language:Python 4

• EricHier / dr-what

  Online tool for translating medical letters

  medical-terminologymedical-terms-detectionwebapp
  Language:Vue 1

• chichibotai / Chichibotai

  Adult entertainment and sex education app for mobile devices.

  gender-identitylgbtqmedical-terminologypop-culturesexualityerotica
  Language:JavaScript 0

• d-k-bo / icd-spellcheck-de

  German word list for spell checking medical terms

  cspellmedical-terminologymedicinespellcheck
  Language:Python