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som-shahlab

som-shahlab

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Location:United States of America

Home Page:https://shahlab.stanford.edu/

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som-shahlab's repositories

ehrshot-benchmark

A benchmark for few-shot evaluation of foundation models for electronic health records (EHRs)

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:123Issues:10Issues:6

femr

FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records

Language:PythonLicense:Apache-2.0Stargazers:94Issues:14Issues:88

medalign

MedAlign is a clinician-generated dataset for instruction following with electronic medical records.

License:MITStargazers:85Issues:21Issues:1

trove

Weakly supervised medical named entity classification

Language:PythonLicense:Apache-2.0Stargazers:69Issues:6Issues:5

Clinfo.AI

This is Clinfo.AI Demo Instruction

Language:Jupyter NotebookLicense:MITStargazers:25Issues:6Issues:2

psych-nlp

Methods for measuring and analyzing therapist language

Language:PythonLicense:MITStargazers:22Issues:6Issues:0

INSPECT_public

INSPECT dataset/benchmark paper, accepted by NeurIPS 2023

Language:PythonLicense:Apache-2.0Stargazers:20Issues:8Issues:3

ehr_ml

Code for doing machine learning with various EHRs

Language:C++License:MITStargazers:19Issues:8Issues:22

aplusml

APLUS ML = A Python Library for Usefulness Simulations of Machine Learning models

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:15Issues:7Issues:7

survlearners

Metalearners for Survival Data

Language:RStargazers:13Issues:5Issues:32

motor_tutorial

Tutorial repository for the official MOTOR release

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:8Issues:0Issues:0

TrialProbe

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:6Issues:3Issues:0

clinical_trial_patient_matching-website

Public facing website for zero-shot CT patient matching paper

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temp_ds_shift_robustness

Language:Jupyter NotebookLicense:MITStargazers:3Issues:6Issues:0

clinical_trial_patient_matching

Zero-shot clinical trial matching with LLMs

Language:PythonStargazers:2Issues:5Issues:0

ehrshot-website

Public website for EHRSHOT

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manifest

Prompt programming with FMs.

Language:PythonLicense:Apache-2.0Stargazers:1Issues:1Issues:0

motor_code_release

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RATE-experiments

Code for reproducing the analyses that appear in "Evaluating Treatment Prioritization Rules via Rank-Weighted Average Treatment Effects"

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constdb-python

ConstDB is a very simple read-only embedded key-value database

Language:PythonLicense:MITStargazers:0Issues:1Issues:0

adult_ped_transfer_learning

Language:Jupyter NotebookLicense:MITStargazers:0Issues:6Issues:0

CLMBR-contrastive-learning

Language:Jupyter NotebookStargazers:0Issues:0Issues:0

data-align

Clinical text summarization by adapting large language models

Stargazers:0Issues:0Issues:0

dill

serialize all of python

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inspect-website

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medalign-website

Landing page and website for the MedAlign project

Language:HTMLLicense:MITStargazers:0Issues:6Issues:0

pad

A repository for building and testing a simple PAD model

Language:PythonStargazers:0Issues:4Issues:0

pancreatic_cancer_tutorial

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shahlab-website

Shah Lab Jekyll website

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starr-omop-bq-datasets

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