tripal
There are 0 repository under tripal topic.
tripal / tripal
The Tripal package is a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage at http://tripal.info for documentation, support, and other information. The Drupal project page is at http://drupal.org/project/tripal.
Language:PHP 66Drupal/Tripal: Drupal integration for GMOD JBrowse instances.
Language:PHP 9galaxy-genome-annotation / dockerized-gmod-deployment
:whale::bar_chart::books: Galaxy + Apollo + Chado + Tripal + JBrowse + JBrowse REST API + PostGraphQL + JBrowse GraphQL Experiment all as a docker-compose.yml
Language:Python 5Provides an user interface to BLAST on Tripal sites.
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NAL-i5K / tripal_eutils
ncbi loader via the eutils interface
Language:PHP 4Extension module for the Tripal toolset to show differential expression data. This module was made for Drupal 7, Tripal 3, and Chado 1.3.
Language:PHP 4UofS-Pulse-Binfo / nd_genotypes
Drupal/Tripal: Tripal interface for Chado Natural Diversity Genotypic data.
Language:PHP 4- Language:Python 3
statonlab / docker-containers
Offers 3 different flavors of docker containers that can be built upon to deploy Drupal and Tripal sites.
Language:Dockerfile 3entity converter for tripal 3
Language:PHP 3A Tripal module, Tripal Remote Job can be used to launch jobs on external/remote servers to avoid overloading the webserver.
Language:PHP 3provides an API for developing consistent biological diagrams with a common configuration, as well as, providing some common diagrams such as pie, bar, column and pedigree diagrams.
Language:JavaScript 3Handle drupal bootstrapping, load environment variables, and easily wrap your tests in DB transactions.
Language:PHP 3- Language:PHP 2
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Mainlab Chado Search: enabling advanced search function for a Tripal/Chado database
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Mainlab Tripal Data Display: extending the display of a Tripal database
This module extends the Tripal Analysis Module and provides a method for loading XML results from the NCBI blast program. Blast results appear on each feature page.
Language:PHP 2This module extends the Tripal Analysis Module and provides a method for loading of KEGG ortholog assignments derived from the KEGG Automated Annotation Server (KAAS). The module reads the compressed .heir file or alternatively an expanded heir directory. KEGG assignments appear on each feature page, and a full KEGG report is available for browsing results once uploaded.
Language:PHP 2Official Documentation for the Tripal Platform
Language:Dockerfile 2This module is for integration of Tripal and a remote Galaxy Instance.
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A Tripal module for storing raw phenotypic data. Specifically meant to help researchers contribute raw data, visualize summaries and download for further analysis.
Language:PHP 2A BibTEX importer for Tripal Publications.
Language:PHP 2shreyas-a-s / oneclick-website-deployer
Bash script to install and setup a basic working drupal website with tripal module installed and activated.
Language:Shell 1- Language:PHP 1
Allows admins to specify links to JBrowse instances on feature pages by adding a pane to the left sidebar on feature pages.
Language:PHP 1Build a simple development environment for Tripal with Docker
Language:PLpgSQL 1A composer tool for easily generating Tripal Fields
Language:PHP 1Make individual pages private while others of the same Tripal Content Type remain public!
Language:PHP 1This is a temporary repository for Drupal 9 upgrade for Tripal v4. It is meant to house issues related to the upgrade.
Language:PLpgSQL 1- Language:PHP 1
TripalCultivate / TripalCultivate-Phenotypes
Provides generic support for large scale phenotypic data and traits with importers, content pages and visualizations.
Language:PHP 1Form interface so users can custom filter existing VCF files and export in a variety of formats.
Language:PHP 1
