Anthony Bretaudeau's repositories
docker-apollo-report
A docker image to generate regular annotation reports from an Apollo instance
ansible-galaxy
An Ansible role for managing a Galaxy server
ansible-tiaas2
Ansible role for deploying TIaaS2
bcbb
Incubator for useful bioinformatics code, primarily in Python and R
bioconda-recipes
Conda recipes for the bioconda channel.
chado-schema-builder
compiles copies of the Chado database and dumps the SQL for use in other tools.
docker-gnb
A docker image for genenotebook
docker-sf-blast
Docker image for a simple blast form using Symfony framework
EBAII
Supports de cours de l'Ecole de Bioinformatique Aviesan - IFB - Inserm "Initiation au traitement des données de génomique obtenues par séquençage à haut débit"
funannotate
Eukaryotic Genome Annotation Pipeline
galaxy-hub
Galaxy Community Hub
galaxy_tool_metadata_extractor
Galaxy Communities Dock aka Galaxy Codex: catalog of Galaxy resources (tools, training, workflows)
genenotebook
A collaborative notebook for genes and genomes
gravity
Galaxy process management and system administration tools
gxadmin
Handy command line utility for Galaxy administrators :rocket:
infrastructure-playbook
Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegalaxy-playbook/
statistics
Public Gallantries statistics
tools-au
A home for local tool wrappers on Galaxy Australia and a testing ground for changes to existing wrappers
training-material
A collection of training material from offered Galaxy courses
unicornherder
Unicorn Herder: manage daemonized (g)unicorns
usegalaxy-eu-tools
List of tools included in https://usegalaxy.eu