singularity-recipe

There are 1 repository under singularity-recipe topic.

• singularity-catalog

  singularityhub / singularity-catalog

  The Singularity Community Catalog of Singularity* recipe files.

  singularitysingularity-containersingularity-catalogsingularity-recipe
  Language:Singularity 10

• Grelot / seaConnect--dDocent

  GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.

  gbsgenomicsvariant-callingradseqddocentstacksingularitysnakemakedemultiplexingsnpgenotypingsingularity-recipevcffastqpopulation-geneticsbioinformatics
  Language:Shell 2

• JBris / install_singularity

  Install Singularity to your Debian/Ubuntu system

  gogolangsingularitysingularity-containersingularity-containerssingularity-recipeapptainerdebiandebian-packagesubuntuapptainer-container
  Language:Shell 1

• juliawiggeshoff / singularity-recipes

  Recipes for Singularity

  bioinformaticssingularitysingularity-recipevcfawsclibambamsurgeononcokb-annotatorvcflibcontainer
  1

• Rudolph-afk / Zoon0PredV

  A DEEP LEARNING APPROACH TO PREDICTING POTENTIAL VIRUS SPECIES CROSSOVER USING CONVOLUTIONAL NEURAL NETWORKS AND VIRAL PROTEIN SEQUENCE PATTERNS

  bioinformaticsdeep-neural-networkshyperparameter-tuningnextflow-pipelinesingularity-recipe
  Language:Jupyter Notebook 1

• sghignone / TransDecoder

  TransDecoder identifies candidate coding regions within transcript sequences.

  miniconda3singularitysingularity-hubsingularity-recipe
  1

• VUIIS / hello-world-MCR

  Test code for generating containers using Singularity and Matlab compiler.

  mcrsingularity-containersingularity-recipematlabmatlab-runtime
  Language:MATLAB 1

• sghignone / alpine-bioperl

  Bioperl 1.7.7 containers based on alpine linux

  containerperlbioperlalpine-linuxsingularity-containerdocker-containersingularitydockersingularity-recipedocker-file
  Language:Dockerfile 0

• sghignone / CAFE

  Computational Analysis of gene Family Evolution (CAFE)

  singularitysingularity-hubsingularity-recipeminiconda3
  0

• horothesun / singularity-conda-multiple-envs

  Singularity containerization of a Conda-based multi-environment bash script.

  condaconda-environmentconda-envsingularitysingularity-containersingularity-containerssingularity-imagesingularity-recipegithub-actionsgithub-actions-cigithub-actions-ci-cdsingularity-cloudmulti-environmentcontainerization
  Language:Shell

• sghignone / Rnnotator

  Rnnotator is an automated software pipeline that generates transcript models by de novo assembly of RNA-Seq data without the need for a reference genome.

  pipelinesingularitysingularity-recipernaseqdockerdockerfile

• ziyun99 / singularity-recipe

  Singularity recipes for applications

  singularitysingularity-recipeoctave