plasmodium-falciparum
There are 0 repository under plasmodium-falciparum topic.
bguo068 / posseleff_empirical
Nextflow pipeline for analyzing empirical WGS data for the effect of positive selection on IBD-based inference
Language:Nextflow 1kevin-wamae / PlasmoSeq-DualTech
A pipeline for variant calling from P. falciparum short reads generated from Illumina and ONT libraries
Language:Python 1pablocarderam / genetargeter
Creates a construct developed by the Niles Lab at MIT, designed to deliver a 3' UTR post-transcriptional regulatory element payload to a specific given gene in Plasmodium falciparum.
Language:Python 1colbyford / Ghana_CSP_Haplotypes
Genetic variations of Plasmodium falciparum circumsporozoite protein and the impact on interactions with human immunoproteins and malaria vaccine efficacy - By Dieng and Ford et al.
Language:PostScript 0nunososorio / Pfalciparum-ReducedACT-Susceptibility
This repository contains data and code for our analysis of the genome of a Plasmodium falciparum strain with reduced susceptibility to Artemisinin-Based Combination Therapy (ACT) drugs. We performed whole-genome sequencing of the HSOG3 clinical isolate and compared it with a large dataset of global P. falciparum samples.
Language:Python 0Rcoppee / Scan_gene_coverage
Calculating the coverage depth for each coding gene and the percentage of each gene covered at ≥ 10X depth.
Language:Python 0sjohri20 / PlasmodiumSynchronisedCellAtlas
Effect of temperature stress on Plasmodium Falciparum. Code for data analysis. Rshiny app for data exploration.
Language:R 0Modeling Plasmodium falciparum Diagnostic Test Sensitivity using Machine Learning with Histidine-Rich Protein 2 Variants
Language:PostScript