posseleff-paper

There are 0 repository under posseleff-paper topic.

bguo068 / snp_call_nf
Nextflow pipeline for plasmodium SNP calling
posseleff-paper nextflow-pipeline plasmodium variant-calling
Language:Nextflow 3
bguo068 / ibdutils
A python package to facilitate identity-by-descent-based analysis
identity-by-descent positive-selection posseleff-paper python selection-correction
Language:Python 1
bguo068 / posseleff_empirical
Nextflow pipeline for analyzing empirical WGS data for the effect of positive selection on IBD-based inference
deconvolution effective-population-size empirical-data ibd-inference imputation infomap multiple-infection plasmodium-falciparum population-structure posseleff-paper whole-genome-sequencing metadata
Language:Nextflow 1
bguo068 / posseleff_simulations
Nextflow pipeline to assess the impact of positive selection on Identity by Descent (IBD)-based inferences, utilizing population genetic simulations and true IBD inferences.
effective-population-size identity-by-descent population-structure positive-selection posseleff-paper true-ibd ibd-based-inferences population-genetic-simulations nextflow-pipeline
Language:Python 1
bguo068 / tskibd
Calculate IBD segments from tree sequence using tskit C API
benchmarking posseleff-paper tree-sequences true-ibd
Language:C++ 1