plant-genomics

There are 1 repository under plant-genomics topic.

simonorozcoarias / Inpactor2
Inpactor2: LTR retrotransposon detector and classificator using Deep Learning
deep-learning deep-neural-networks bioinformatics plant-genomics ltr-retrotransposons
Language:Jupyter Notebook 15
lauralwd / azolla_MYBs
Phylogeny and classification of Azolla filiculoides MYB genes
phylogeny biology protein-evolution transcription-factors open-data open-science open-notebook science-research plant-genetic-resources plant-genomics
Language:HTML 0
Orpowell / NLR-Assembler
NLR-Assembler is a command line tool for improving RenSeq Assemblies using linked-read sequencing by 10x Genomics.
bioinformatics-pipeline bioinformatics-tool genomics-analysis plant-genomics
Language:Python 0
plantgenomes.github.io
plantgenomes / plantgenomes.github.io
"植物基因组"(plantgenomes)微信公众号
weixin plantgenomes plant genomes bioinformatics genomics plantgenomics plant-genomics plant-genomes wechat
0
almeidasilvaf / plant_transcriptomes
Data and code used in the Plant Genomes dashboard
plant-genomics rna-seq ncbi-sra transcriptomics
Language:R
almeidasilvaf / planttfhunter
An R package to identify plant transcription factors from protein sequence data and classify them in families
rstats transcription-factors protein-domains gene-families functional-genomics hidden-markov-models plant-genomics plants
Language:R
lauralwd / LAR_phylogeny_gungor-et-al-2020
Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.
phylogeny biology protein-evolution open-data open-science open-notebook science-research plant-genetic-resources plant-genomics orthologues
Language:Jupyter Notebook