mitochondrial-variants
There are 0 repository under mitochondrial-variants topic.
- Language:Python 95
lmtani / wf-human-mito
Workflow for human mitochondria analysis
Language:Nextflow 9zouyinstein / hifisr
HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high-fidelity (HiFi) reads or Circular Consensus Sequencing (ccs) data, to a reference genome (i.e., the hypothetical master cycle DNA).
Language:Python 7ammodramus / mope
Infer the dynamics of mitochondrial heteroplasmy during different life stages using population genetics and phylogenetics
Language:Python 5jvandinter / MitoCallPipeline
A pipeline for mitochondrial mutation calling
Language:HTML 3TLenfers / multispecies_mitochondrial_variant_analysis
This workflow performs a variant analysis on mitochondrial genomes using the bcftools variant caller. For human samples, the workflow also performs a variant analysis using mutserve.
Language:Python 2- phdscripts
asw0049 / phdscripts
This repository will house the scripts used to analyze and represent genomic and temperature data for my dissertation.
Language:Shell 1 filcfig / PCP
PrecisionCallerPipeline (PCP) automatically takes Precision ID mtDNA Whole Genome Panel (Thermo Fisher Scientific, USA) FASTQ files and outputs BAM files correctly aligned to the rCRS.
Language:Shell 0huruifeng / MitoX
MitoX: exploring mitochondrial variants and gene expressions from single cell sequencing assays
Language:Python
