Jip van Dinter's repositories
MitoCallPipeline
A pipeline for mitochondrial mutation calling
container_pilot
pilot pipeline that includes tool containerization
Cornel_et_al_2023
Code for Cornel et al., Submitted (2023)
Language:R000
dockerfiles
Keeps track of all docker images I have created for our pipelines
ORFquant
An R package for Splice-aware quantification of translation using Ribo-seq data
Language:HTMLGPL-3.0000
Language:HTML000
riboseq_initial_check
All up-to-date pipelines in a single location
Language:ShellGPL-3.0000
RiboseQC
Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.
Language:R000
rms_analysis
Code used for the analysis of rhabdomyosarcoma samples
Language:Shell000