metabolic-model

There are 0 repository under metabolic-model topic.

• areias03 / tmCOM

  GitHub repository to support the development of the thesis "Development of microbial community simulation methods to characterize and analyze the effects of metal concentrations on pathogen silencing/promotion".

  bioinformaticsenzyme-constraintsmetabolomicsmodellingmetabolic-modelmicrobial-communities
  Language:Jupyter Notebook 1

• pwendering / RhiirGEM

  Genome-scale metabolic reconstruction of Rhizophagus irregularis

  arbuscular-mycorrhizal-fungiconstraint-based-modelingmetabolic-model
  Language:HTML 1

• sysbiomics / aspergillus_model

  Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae

  aspergillus-oryzaeflux-balance-analysismetabolic-modelmetabolic-networkreconstructed-metabolic-network
  Language:MATLAB 1

• SystemsBioinformatics / elementary-mode-based-FBA-rationale

  Code that uses Elementary Conversion Mode computation to obtain all relevant conversions for a constraint-based optimization problem, i.e., all possible optimal yields between the constrained nutrients and the objective function. As published in Metabolites https://doi.org/10.3390/metabo11050257

  fbaefmsystems-biologymetabolic-modelpython
  Language:Python 1

• pwendering / ArabidopsisCoreModel

  Platform for further development of the Arabidopsis core metabolic model

  arabidopsis-thalianametabolic-modelphotosynthesisplant-metabolic-model
  Language:MATLAB 0

• pwendering / AraTModel

  Integration of temperature-dependent constraints into a metabolic model of Arabidopsis thaliana

  arabidopsis-thalianametabolic-modelphotosynthesistemperature
  Language:MATLAB 0

• maranasgroup / iRhto_memote

  Memote-created repository for Rhodosporidium toruloides model iRhto

  constraint-based-modelingmetabolic-modelmetabolismyeast
  Language:HTML

• maranasgroup / iSace_GSM

  Repository of a genome-scale metabolic model for Saccharomyces cerevisiae

  constraint-based-modelingmetabolic-modelmetabolismsaccharomyces-cerevisiaeyeast
  Language:Jupyter Notebook