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This directory contains all the elements and structure of the napari-aphid plugin
The scripts uploaded in this repository were developed for the automated processing of fluorescence microscopy images of Nile Red stained microplastics
Pre- and Post-processing floc images You will find for MATLAB codes to process your images. Pre-processing: CroppingImages Post-processing: FlocCounter, PlotFlocCounterML_interactions, ContourOverlayImage CroppingImages: This code crops the batch images FlocCounter: This code counts flocs using batch images PlotFlocCounterML_interactions: This code shows the evolution of each training ContourOverlayImage: This code performs a delimitation of the edges of the detected flocs
Detection and segmentation of diseases on wheat leaves.
“Novel Marker Distribution Pipeline for Analysis of Cell Based Quantitative Spatial Information”. The aim of this research was to analyse quantitative spatial information and provide intuitive visualisation relating to the identification of cells relative to tissue structure and pathology such as cancer tumour.