higlass

There are 0 repository under higlass topic.

• higlass / higlass

  Fast, flexible and extensible genome browser.

  gehlenborglabgenomicshi-chiglassvisualization
  Language:JavaScript 308

• gosling-lang / gos

  A declarative library for Python designed to create interactive multi-scale visualizations of genomics and epigenomics data.

  bioviscolabdata-visualizationdatavizgehlenborglabgoslinggrammarhiglassjupyterpythonvisualization
  Language:Python 204

• hms-dbmi / hic-data-analysis-bootcamp

  Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

  4d-nucleome-networkcoolerdata-visualizationgehlenborglabhi-chiglasshipiler
  Language:Jupyter Notebook 187

• gosling-lang / gosling.js

  Grammar of Scalable Linked Interactive Nucleotide Graphics

  datavizgehlenborglabgenomicsgoslinggrammarhidivelabhiglasstypescriptvisualizationwebgl
  Language:TypeScript 155

• hms-dbmi / 3d-genome-processing-tutorial

  A 3D genome data processing tutorial for ISMB/ECCB 2017

  gehlenborglab4d-nucleome-networkhi-cvisualizationhiglasstutorial
  Language:Jupyter Notebook 48

• higlass / clodius

  Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.

  hi-chiglassgehlenborglab
  Language:Python 37

• higlass / higlass-docker

  Builds a docker container wrapping higlass-server and higlass-client in nginx

  higlasshi-cgehlenborglab
  Language:Shell 30

• higlass / higlass-manage

  A utility script to manage local docker instances of HiGlass

  gehlenborglabhiglass
  Language:Python 19

• higlass / higlass-server

  Server component for HiGlass that manages and serves tiled data

  higlasshi-cgehlenborglab
  Language:Python 18

• flekschas / higlass-scalable-insets

  Scalable Insets for HiGlass: a new technique for interactively exploring and navigating large numbers of annotated patterns in multiscale visual spaces such as gigapixel images, matrices, or maps.

  higlassexplorationdata-visualizationmultiscalepattern-searchpattern-discoverypattern-analysis
  Language:Jupyter Notebook 16

• hms-dbmi / cistrome-explorer

  Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling

  gehlenborglabhiglass
  Language:Jupyter Notebook 13

• higlass / higlass-arcs

  HiGlass track for displaying arcs between disconnected regions

  higlassarcs-trackarcs
  Language:JavaScript 9

• higlass / higlass-multivec

  Multivec Tracks for Higlass

  gehlenborglabhiglassvisualization
  Language:HTML 6

• flekschas / higlass-fancy

  A collection of fancy HiGlass view configs

  higlasshi-c3d-genomefancy
  3

• higlass / higlass-website

  HiGlass Project Website

  hi-chiglasswebsitematrixgehlenborglab
  Language:HTML 3

• alexpreynolds / hglive

  HiGlass-backed dynamic BED gallery browser

  higlassreactexpressjsbedbioinformaticsvisualizationjavascript
  Language:JavaScript 2

• higlass / range-track

  A plugin track for displaying ranges in HiGlass

  higlasswhiskerrange
  Language:JavaScript 2

• flekschas / higlass-geojson

  GeoJSON Track for HiGlass

  higlassgeojsonopenstreetmapmapbox
  Language:JavaScript 1

• hms-dbmi / cistrome-higlass-demo

  HiGlass demo with Cistrome data sets.

  gehlenborglabhiglassdatavisualizationepigenomics
  Language:HTML 1

• hms-dbmi / higlass-story

  A tool to create scrollytelling-based stories with HiGlass.

  higlassgehlenborglab
  Language:JavaScript 1

• flekschas / higlass-labeled-annotation

  Labeled Annotation Track for HiGlass

  higlassannotationslabelingimage
  Language:JavaScript

• flekschas / higlass-svelte

  Example app how to integrate HiGlass into Svelte

  higlasssvelte
  Language:HTML

• refinery-platform / refinery-higlass-docker

  "Refinery-ified" flavor of the higlass-docker (https://github.com/hms-dbmi/higlass-docker/) project

  dockerhiglassrefinery-platform
  Language:Python

• robomics / generate_higlass_gene_track

  Nextflow workflow to generate gene track files for HiGlass

  bioinformaticshiglassbioinformatics-pipelinegene-annotationnextflow
  Language:Nextflow