gene-expression-analysis

There are 0 repository under gene-expression-analysis topic.

• snakemake-workflows / rna-seq-star-deseq2

  RNA-seq workflow using STAR and DESeq2

  snakemakesciworkflowsreproducibilitygene-expression-analysisdeseq2
  Language:Python 312

• sivkri / small-RNA-Seq-Analysis

  scripts and resources for performing miRNA sequencing analysis using tools like mirPRo and miRDeep2. Explore the code to process reads, map them to the genome, quantify known miRNAs, identify novel miRNAs, and browse the results

  mirna-seqmirnabioinformaticsgene-expression-analysisnext-generation-sequencingrna-seq-analysismirna-sequencingsmall-rna-analysis
  Language:Shell 2

• lhartmanis / compound-screen

  Code and analysis scripts for analyzing newly transcribed RNA in large-scale compound screen experiments

  gene-expression-analysishigh-throughput-screening
  Language:Python 0

• sivkri / RBP-Data-Processing

  RBP-Data-Processing is a repository containing R code for processing RNA-binding protein (RBP) datasets. The code imports the data table, performs data cleaning and transformation operations, and saves the processed dataset. It provides a convenient and reproducible workflow for analyzing RBP data obtained from external sources.

  gene-expression-analysisrrna-binding-proteinstidyr
  Language:R 0

• thisisyichenzhang / matrix_completion

  Scaled matrix completion and cell deconvolution with NanoString data, Yichen Zhang, 2019

  gene-expression-analysismatrix-completion
  Language:R 0

• Aniket7651 / biosys-net

  Bioinformatics package created in C# and python, which can analyze biological data such as DNA, RNA and protein sequences, Biological Databases Scrapping, As well as 'GEO Analysis' offers a variety of analysis on RNA-seq. Preprocessing, parsing various biological file formats (FASTA, PDB, SOFT, FASTQ, etc.), this all using C# language and dotnet.

  bioinformatics-toolbiological-data-analysisgene-expression-analysisbiological-file-formatscsharp-bioinfo
  Language:C#