flow-cytometry-analysis
There are 2 repositories under flow-cytometry-analysis topic.
- Language:Python 202
whitews / FlowKit
A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
Language:Python 186- Language:Python 49
- Language:Python 42
tlnagy / FCSFiles.jl
🧫 Read Flow Cytometry Standard (FCS) files in Julia
Language:Julia 17FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation tasks commonly used within the flow community.
Language:Python 17laderast / flowDashboard
Shiny Modules for visualizing flow cytometry data
Language:R 8- Language:R 5
gitdemont / IFCshiny
An R Interactive Shiny Application for the Analysis of Imaging and Conventional Flow Cytometry
Language:R 5xuesoso / DensityPlot
A simple python plotting package for density and scatter plotting.
Language:HTML 5- Language:JavaScript 4
- Language:C++ 3
AUMC-HEMA / cMRD-manuscript
Code used for computational detection of MRD in AML using flow cytometry data.
Language:Jupyter Notebook 1A small R package containing useful R functions for cytometry data for internal use.
Language:R 1This repository contains the code used in our benchmark of imputation tools for flow cytometry data.
Language:Jupyter Notebook 1MargaritaLiarou1 / TimeFlow
TimeFlow: a density-driven pseudotime method for flow cytometry data analysis.
Language:Jupyter Notebook 1SangerCytometry / R-Scripts
R scripts to help with your flow cytometry analysis. Batch index export and overlays
Language:R 1taniawyss / flow-cytometry-analysis-with-R
Flow cytometry data analysis with R
Zennx / FISHSpotCounter
High throughput single-cell analysis pipeline with ML-powered adaptive k value thresholding for spot counting of Fluorescent in-situ Hybridisation (FISH) spots from Amnis true imaging flow cytometers. Ongoing development.
Language:Python 1jameswilsenach / FlowFI
FlowFI is a python-based package for selecting important features for gating of flow cytometry events and analysis of these features.
Language:Python 0JulianSpagnuolo / FACkit
FACkit is a complete R toolkit providing transformation, data-exploration, dimensional-reduction and clustering methods tailored to semi-automated analysis of FACS data
Language:R 0maiabennett / NK-FlowSOM-analysis
Graph-based analysis of natural killer (NK) cell phenotypes in flow cytometry-based immunotherapy assays using FlowSOM.
Language:R 0MCFC-Community / MCFC_Data_challenge
Data Challenge for microbial community flow cytometry
0
