dnanexus
There are 0 repository under dnanexus topic.
- Language:Scala 32
CCBR / Dockers
A collection of Dockerfiles to facilitate reproducibility across computing environments.
Language:Dockerfile 11- Language:Python 2
collaborativebioinformatics / DSVifier
A bioinformatics pipeline for rapidly evaluating variants and identifying causal variants.
Language:C++ 1- Language:Shell 1
StanfordBioinformatics / trjread-source
Source files for DNAnexus applets
Language:XSLT 1- Language:C++ 0
ieee820 / common-workflow-language
Repository for the CWL standards. Use https://www.biostars.org/t/cwl/ for support 😊
Language:Python- Language:Ruby
moka-guys / dnanexus_BWA
DNAnexus app mapping FASTQ reads (paired or unpaired) to a reference genome with the BWA-MEM algorithm
Language:ShellDNAnexus app for uploading samples to the Congenica analysis platform
Language:ShellDNAnexus implementation of duty_csv. To be used in conjunction with process_duty_csv
Language:Shell- Language:Shell
This app calculates the readcount for a batch of samples for CNV calling using ExomeDepth.
Language:Shell- Language:Shell
DNAnexus app running MultiQC to generate run wide quality control (QC) using the outputs from MokaAMP, MokaPipe and MokaWES pipelines
Language:ShellThe app creates a panel of normals for Exomedepth
Language:ShellDNAnexus app running peddy v0.3.1 (https://github.com/brentp/peddy) to perform a run wide QC check that the assigned gender matches the sample
Language:Shell- Language:Shell
- Language:Shell
- Language:Shell
Software suite for updating and managing data on DNAnexus
Command-line tool to automatically build workflows on DNAnexus
Language:HTML
