CCR Collaborative Bioinformatics Resource's repositories
CCBR_NextflowTemplate
CCBR template for Nextflow workflows
bioinfo-pf-curie-chip-seq
Nextflow pipeline for ChIP-seq data quality controls and analysis
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ccbr1271_ERVpipeline
ERV pipeline based of scripts from NCI Yasmine Belkaid Lab
CCBR_tobias
Tobias implementation for ATAC seq data.
DSP_Analysis
A repository for general information and analysis templates for Nanostring's Digital Spatial Profiling
nf-modules
Reusable modules and subworkflows for CCBR nextflow pipelines
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nf-sandbox
a repo for testing and toying with nextflow
nfcore_methylseq
nf-core Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
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