commonwl

There are 1 repository under commonwl topic.

• common-workflow-language

  common-workflow-language / common-workflow-language

  Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

  common-workflow-languagecommonwlcontainerscwlsciencesciworkflowsworkflowworkflows
  Language:Common Workflow Language 1471
• cwltool

  common-workflow-language / cwltool

  Common Workflow Language reference implementation

  common-workflow-languagecommonwlcontainerscwlsciencesciworkflowsworkflows
  Language:Python 357

• Barski-lab / cwl-airflow

  Python package to extend Airflow functionality with CWL1.1 support

  cwl-airflowworkflowcwlcommon-workflow-languagecontainersdagcwl-descriptorcommonwl
  Language:Python 192

• galaxyproject / planemo

  Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training materials.

  cliclickcommonwlhacktoberfestsdkusegalaxy
  Language:Python 96

• rabix / bunny

  [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0

  cwlworkflowdockerexecutorjavacommon-workflow-languagecommonwl
  Language:Common Workflow Language 75
• cwl-utils

  common-workflow-language / cwl-utils

  Python utilities for CWL

  common-workflow-languagecommonwlcwl
  Language:Python 40

• common-workflow-lab / wdl2cwl

  [Experimental] Workflow Definition Language (WDL) to CWL

  commonwlcwlwdlwdl-workflow
  Language:Python 28

• common-workflow-lab / wdl-cwl-translator

  A translator from WDL to CWL v1.2

  commonwlcwlwdl
  Language:Common Workflow Language 27

• common-workflow-language / cwljava

  Java SDK for the Common Workflow Language standards

  commonwlcwljava
  Language:Java 14

• tom-tan / ep3

  A workflow engine for CWL that aims to have a pluggable architecture

  common-workflow-languagecommonwlworkflow-engineworkflowcwl
  Language:Ruby 10

• fairagro / m4.4_sciwin_client

  🦀 SciWIn Client: Reproducible computational Workflows made easy!

  automationcommon-workflow-languagecwlrdmworkflowcommonwlsciencesciworkflowssciwinfairagrorust
  Language:Rust 8

• tom-tan / cwl-template-for-vscode

  A template to write CWL documents with VSCode with remote container extension

  commonwlcwlvscodecommon-workflow-languagetemplate
  Language:Dockerfile 8

• tom-tan / schema-salad-d

  Salad validator library written in D

  avrocommonwldlangsaladvalidator
  Language:D 7

• tom-tan / shaft

  A workflow engine for CWL CommandLineTool

  commonwlworkflow-engine
  Language:D 6
• cwl-upgrader

  common-workflow-language / cwl-upgrader

  Upgrade CWL syntax to a newer version

  commonwlcwl
  Language:Python 5

• tom-tan / zatsu-cwl-generator

  Simple CWL document generator from given execution commands

  commonwlcwlcommon-workflow-languagedlang
  Language:D 5

• common-workflow-lab / cwl-d-auto

  Autogenerated classes for reading and writing CWL objects using the D language

  commonwlcwldlangparser
  Language:Common Workflow Language 3

• common-workflow-lab / cwl-language-server

  A Language Server for CWL

  common-workflow-languagecommonwlcwllanguage-server
  Language:Python 3

• common-workflow-language / acd2cwl

  CWL generator for ACD (EMBOSS) files

  commonwl
  Language:Python 3
• drill-hawk

  tom-tan / drill-hawk

  A visualizer of workflow execution records for CWL

  common-workflow-languagecommonwlcwlvisualizer
  Language:HTML 3

• fairagro / m4.4_sciwin_client_examples

  Example Projects for SciWIn Client

  commonwlcwlworkflowsciwin
  2

• mr-c / hive-cwl-examples

  biocompute-objectscommonwl
  2

• common-workflow-lab / run-tests

  Action for running tests for CWL workflows

  common-workflow-languagecommonwlcwltesting
  1

• common-workflow-lab / run-conformance-tests

  Action for running CWL conformance tests

  cwlcommonwlcommon-workflow-language

• common-workflow-lab / upload-conformance-badges

  Action for uploading CWL conformance badges

  common-workflow-languagecommonwlcwl

• fairagro / m4.4_demo_corn_prediction

  commonwlcwlsciwin
  Language:Python

• fairagro / m4.4_metrics

  A CWL Workflow which collects metrics about SciWIn-Client - created with SciWIn-Client

  commonwlcwlsciwinworkflow
  Language:Python

• ktaletsk / cwl-examples

  commonwlcommon-workflow-languagecromwellcwl
  Language:Common Workflow Language

• tom-tan / conformance

  Location to store the results of CWL conformance testing for ep3

  common-workflow-languagecwlcommonwl

• tom-tan / core-wire

  A tool/library to make CWL engines connected to remote resources

  common-workflow-languagecommonwllibraryworkflows
  Language:D