cancer-subtype
There are 0 repository under cancer-subtype topic.
collaborativebioinformatics / Disease_subsetting
Colorectal cancer CMs subtyping and personalized medication recommendation based on RNA seq pathway analysis
Language:Jupyter Notebook 9dmitrykazhdan / METABRIC-Autoencoder
Extracting High-Quality Features From Biomedical Datasets Using Multimodal Autoencoders
Language:Python 3mcmzxx / mfMap.py
This repository contains code for MFmap (model fidelity map), a semi-supervised generative model integrating gene expression, copy number and mutation data, matching cell lines to cancer subtypes. MFmap compresses high dimensional omics data of cell lines and bulk tumours into subtype informative low dimensional latent representations and predicts the subtype of cell lines with high accuracy and good generative performance. http://h2926513.stratoserver.net:3838/MFmap_shiny/
Language:Python 2Ronlee12355 / GCclassifier
GCclassifier: An R package for the prediction of molecular subtypes of gastric cancer
Language:R 2nedaghohabi / Colorectal_Cancer_Subsetting
Colorectal cancer CMSs subtyping and personalized medication recommendation based on RNA seq pathway analysis
Language:Jupyter Notebook 0AliAlfatemi / PCAG
Patient subgrouping with distinct survival rates via integration of multiomics data on a Grassmann manifold
Language:MATLAB