Neda Ghohabi's repositories
Colorectal_Cancer_Subsetting
Colorectal cancer CMSs subtyping and personalized medication recommendation based on RNA seq pathway analysis
CRC-Dashboard
Colorectal Cancer Subtypes
CRC-Microbiome-Classification
Prediction of colorectal cancer (CRC) phenotype based on Microbiome Metagenomics
dsmil-wsi
DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image
Genevar22
GeneVar is an open-access, gene centric data browser for structural variants (SVs) analysis. https://jmonlong.shinyapps.io/GeneVar/
Histopathology-Image-Tiling
tessellating tumor area in whole slide images into square tiles
omics-miner
Patient stratification and molecular mechanism identification using patient clinotypes and transcriptomics embeddings
PC-CHiP
Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis
TCGA-RNA-seq
TCGA Colorectal Cancer RNA seq Data Analysis Pipeline