cellline-tumor-matching

There are 0 repository under cellline-tumor-matching topic.

• mcmzxx / mfMap.py

  This repository contains code for MFmap (model fidelity map), a semi-supervised generative model integrating gene expression, copy number and mutation data, matching cell lines to cancer subtypes. MFmap compresses high dimensional omics data of cell lines and bulk tumours into subtype informative low dimensional latent representations and predicts the subtype of cell lines with high accuracy and good generative performance. http://h2926513.stratoserver.net:3838/MFmap_shiny/

  generative-modelvaesemi-supervised-learningcancergenomicscancer-stratificationcell-linestcgacclehigh-dimensional-datacellline-tumor-matchingtranslational-medcinecancer-subtypein-silico-perturbationdrug-response
  Language:Python 2