bioregistry

There are 2 repositories under bioregistry topic.

callahantiff / PheKnowLator
PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models
knowledge-graph ontologies biomedical-applications mechanisms translational-research linked-open-data owl semantic-web benchmarks obofoundry bioregistry biolink-model hacktoberfest
Language:Python 151
pybel / pybel
🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
systems-biology networks biological-expression-language bioinformatics domain-specific-language networks-biology pybel bioregistry
Language:Python 131
bioregistry
biopragmatics / bioregistry
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
biopragmatics bioregistry biocuration
Language:Python 106
biopragmatics / pyobo
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
obo ontologies obofoundry biopragmatics bioinformatics bioregistry
Language:Python 59
biopragmatics / biomappings
🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
biopragmatics biocuration ontology semantics mappings bioregistry
Language:Jupyter Notebook 49
linkml / prefixmaps
Semantic prefix map registry
bioregistry linkml obofoundry prefixmaps
Language:Python 10

callahantiff / PheKnowLator