alphafold-multimer

There are 1 repository under alphafold-multimer topic.

• Uni-Fold

  dptech-corp / Uni-Fold

  An open-source platform for developing protein models beyond AlphaFold.

  alphafoldalphafold-multimerdeep-learningprotein-structurepytorch
  Language:Python 398

• flyark / AFM-LIS

  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)

  alphafold-multimerprotein-protein-interaction-predictionalphafold2alphafold3colabfold
  Language:Jupyter Notebook 58

• lipan6461188 / AlphaFold-StepByStep

  Run AlphaFold2 (and multimer) step by step

  alphafold2alphafold-multimer
  Language:Python 37

• AspirinCode / awesome-BioMolGenFold

  RNA, mRNA, DNA, Peptide, Protein, Antibody and Complex | Folding

  alphafoldalphafold-multimerequifoldesmfoldomegafoldopenfoldrosettafolduni-fold
  33

• johnnytam100 / AlphaCutter

  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.

  alphafoldalphafold-multimeralphafold2bioinformaticsdisordered-proteinsproteinprotein-structurestructurealphafold3
  Language:Python 15

• johnnytam100 / awesome-protein-design

  A curated list of awesome protein design research, software and resources.

  alphafoldalphafold-multimeralphafold2bioinformaticsbioinformatics-toolmolecular-biologyprotein-designprotein-functionprotein-sequenceprotein-structurestructural-bioinformaticsstructural-biologyprotein-engineeringprotein-foldingprotein-protein-interactionprotein-structure-prediction
  14

• sami-chaaban / alphascreen

  Screen interactions with AlphaFold Multimer

  alphafoldprotein-protein-interactionalphafold-multimer
  Language:Python 11

• fmi-basel / GUIFold

  GUI for running jobs with a local installation of AlphaFold2. Supports submission to queuing systems.

  alphafold-multimeralphafold2guipipeline
  Language:Python 7

• tuftsdatalab / Intro_To_AlphaFold2

  A Tufts Research Technology Workshop detailing how to use AlphaFold 2 on the Tufts HPC cluster

  workshopalphafold2alphafold-multimerprotein-structure
  Language:HTML 5

• walterlab-HMS / SPOC

  Code repository for the SPOC tool for scoring binary AF-M predicitons.

  alphafold-multimerprotein-protein-interactionsstructure-prediction
  Language:Perl 5

• sami-chaaban / PointPAE

  Map AlphaFold PAE values on a model

  alphafold-multimerchimeraxvisualizations
  Language:Python 4

• imbforge / fold2go

  fold2go is a nextflow pipeline for in silico prediction of protein structures and interactions through various machine learning models.

  alphafold-multimeralphafold2alphafold3boltznextflowpipelineprotein-structure-predictionhpcworkflow
  Language:Python 1

• rvhonorato / alphafold-hpc-wrapper

  AlphaFold-wrapper for small HPC

  alphafoldalphafold-multimercligolanghpcslurmwrapper
  Language:Go 1
• RAPSAP

  CSB-Thukral-Lab / RAPSAP

  RAPSAP is a comprehensive archive of protein structures that pertain specifically to autophagy, aimed at improving structural understanding of the biological process

  alphafold-multimerautophagymdproteins
  0

• kaysc / af_arman

  Repo to build AF models of endogeneous ligands

  alphafold-multimergpcrmolecular-modeling
  Language:Shell 0

• pritampanda15 / Protein-Modeling

  AI based protein modeling and design

  alphafold-multimeralphafold2alphafold3
  Language:Python

• srom / afpd

  AlphaFold pulldown implementation adapted from https://github.com/KosinskiLab/AlphaPulldown

  alphafoldalphafold-multimeralphapulldowncolabfold
  Language:Jupyter Notebook