Institute of Molecular Biology (IMB)

Institute of Molecular Biology (IMB) 's repositories

NGSpipe2go

a set of NGS pipelines

Language:RGPL-3.023 11 64

encodeChIPqc

Language:R400

toolshed

Language:R200

DistancePlotter

Language:R100

liftover

Language:RGPL-3.01 30

Multiplot

create mutliple plots of text files including gating

Language:R100

2colorMinimizer

Minimize distance in 2 color experiments

Language:R000

dataMiner

Data exploration and visualization

Language:R000

dupRadar

Assessment of duplication rates in RNA-Seq datasets

Language:RGPL-3.0000

imbforge.github.io

Language:HTML000

awesome-containers

CC0-1.0000

awesome-single-cell

List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

MIT000

bpipe

Bpipe - a tool for running and managing bioinformatics pipelines

Language:GroovyNOASSERTION000

parkour2

Keeping track of sequence data! 👩🏻‍🔬 🧬 👨🏽‍💻

Language:Python010

rrvgo

Reduce + Visualize GO

Language:RGPL-3.0000

singularity-hpc

Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.

Language:PythonMPL-2.0000

starrpeaker

STARRPeaker: STARR-seq peak caller

Language:PythonGPL-3.0000

sysops

a collection of lmod modules

Language:Lua000