Pritam Kumar Panda's repositories
Raman-Phonon-VASP
Tutorial
Fastq-manipulation-in-R
How to utilize R programming for predicting quality metrics for Fastq files.
Flow-Cytometry-analysis-in-R
High-throughput FACS analyses with R
open-interpreter
A natural language interface for computers
project-based-learning
Curated list of project-based tutorials
CytoExploreR-Interactive-visualization
CytoExploreR: A Comprehensive Open-Source R Package for Interactive Cytometry Data Analysis
nextflow-R-Seurat
RNAseq pipeline using Nextflow
R-pipeline-for-scrnaseq
R Quarto code for scRNAseq
snakemake-scRNAseq-analysis
R Quarto code for scRNAseq
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
git-version-control
Tutorial on git version control with basic and advanced commands
Machine-Learning
Machine Learning Specialization Course by Stanford and Deep Learning
molgenis-emx2-hitron-backend
Data portal backend built using molgentis-emx2
NEB-Siesta
How to compile siesta using LUA and Flook library and run NEB calculations
nextflow-SRAtools
Nextflow pipeline to prefetch SRA files and convert to fastq using fastq-dump
nf-core-qualitycontrol
Quality control of fastq files using FastQC, MultiQC, FastP and FAQCS
nf-core-seurat
R package for post processing of h5 files from public databases using Seurat-R package
r-seurat-scripts
Scripts to install as a Bioconda package for making workflows
scRNA-seq_notes
A list of scRNA-seq analysis tools
viamd
Visual Interactive Analysis of Molecular Dynamics
workshop-reproducible-research
NBIS/ELIXIR course: Tools for Reproducible Research