wdecoster / NanoPlot

Plotting scripts for long read sequencing data

http://nanoplot.bioinf.be

wdecoster/NanoPlot Issues

Timezone-aware issue when processing fastq rich data
Closed a year ago
Not all dots seem to be plotted
Updated a year ago3
Nanoplot quality thresholds are poorly tuned for current datasets
Updated a year ago1
Online tool not working
Closed a year ago2
module 'matplotlib.cm' has no attribute 'cmap_d'
Updated a year ago1
Issue with dependency Plotly
Closed a year ago2
NanoPlot 1.41.0 has crashed :-(
Closed a year ago4
mean quality is different between 1.40.2 and 1.41.0
Closed a year ago1
How is mean Qscore calculated? Why is it different from the mean of the mean_qscore from the sequencing_summa
Closed a year ago1
Feature Request: Additional Quality Cutoffs
Closed a year ago1
Read quality 20 with low percentage of identity
Closed a year ago3
OSError: not a gzip file
Closed a year ago1
Can't install Nanoplot
Closed a year ago1
multiple plots
Closed a year ago1
raw plot data
Closed a year ago1
NanoPlot crashed - OSError: [Errno 24]
Closed a year ago3
NanoPlot 1.41.0 AttributeError: 'list' object has no attribute 'lower'
Closed a year ago4
Changelog
Updated a year ago
Installation Error NanoPlot
Closed a year ago6
Conda installation
Closed a year ago4
Adaptive sampling info
Closed a year ago3
nanopore reads quality is too low
Closed a year ago
NanoPlot memory overflow with –barcoded option
Closed a year ago4
kaleido and internet access
Updated 2 years ago2
TypeError: can only concatenate str (not "list") to str
Closed 2 years ago1
Nanostat v Nanoplot
Closed 2 years ago2
Transform failed with error code 1: Failed to serialize document: Uncaught
Closed 2 years ago2
About default min read quality setup
Closed 2 years ago2
platform_shared_memory_region_posix.cc error
Closed 2 years ago3
Label of the y-axis of the weighted histograms
Closed 2 years ago1
NanoPlot web service input size requirement is a bit small
Closed 2 years ago3
An error with nanoplot
Closed 2 years ago4
dependencies missing after pip install NanoPlot and pip install NanoPlot --upgrade
Closed 2 years ago3
NanoPlot: error: arguments required + command not found
Closed 2 years ago5
Command errored out
Closed 2 years ago2
TypeError: get_input() got an unexpected keyword argument 'keep_supp'
Closed 2 years ago3
Tooltip showing log length instead of length
Closed 2 years ago1
when to use --huge?
Closed 2 years ago13
PermissionError: [Errno 13] Permission denied
Updated 2 years ago
Running on rebasecalled reads including methylation information
Closed 2 years ago3
Feature Request : tab or comma delimited
Closed 2 years ago2
Is there a way just to extract raw data - pickle and tsv format?
Closed 2 years ago2
PermissionError: [Errno 13] Permission denied: '/usr/local/lib/python3.9/site-packages/kaleido-0.2.1-py3.9-linux-x86_64.egg/kaleido/executable/kaleido'
Closed 2 years ago1
PolyCollection' object has no property 'stat_func' error
Closed 2 years ago1
Support for multi-format output figures
Closed 2 years ago2
problem after conda installation
Closed 2 years ago2
`distplot` function not working
Closed 2 years ago1
Nanoplot histgrams has minus bars
Closed 2 years ago5
analysis pass only
Closed 2 years ago1
Suggestions for speeding up Nanoplot
Updated 2 years ago3