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wdecoster / NanoPlot

Plotting scripts for long read sequencing data

Home Page:http://nanoplot.bioinf.be

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analysis pass only

aspitaleri opened this issue · comments

commented

Hi
would be possible to add an option to Nanoplot in order to perform statistical analysis on the pass reads only?

commented

There already is a --minqual option. By default, the pass reads are those with Q>7, but that is something that users can choose in the guppy parameters.