variation-graph
There are 5 repositories under variation-graph topic.
- Language:C++ 1077
- Language:TypeScript 85
- Language:C++ 34
- pancat
Tharos-ux / pancat
Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions
Language:Python 31 algbio / GraphChainer
An accurate aligner of long reads to a variation graph, based on co-linear chaining
Language:C++ 25- Language:TypeScript 19
- Language:C++ 18
- Language:C++ 11
SandraLouise / SVJedi-graph
SV genotyper for long reads with a variation graph
Language:Python 8- Language:Go 6
JervenBolleman / handlegraph4jRDF
Handlegraph RDF writers in java for working with variation graph genome data.
Language:Java 3- Language:Python 2
jachansantiago / vg_recal
This is experiment to measure performance in vg recalibrate, testing different models.
Language:Jupyter Notebook 1Notes upon pangenome graphs construction
Language:TypeScript 1- Language:Python 1
- Language:Java
