tsslab

There are 0 repository under tsslab topic.

dgavr / Single_Cell_Iterative_Pooling
Iteratively randomly pooling scRNA-seq expressing a given gene from different numbers of cells and running DESeq2 with fdrtools correction to determine how many times which genes come out as enriched with said gene
scrna-seq scrna-seq-analysis deseq2 bootstrap iterative-methods fdr foxd3 neural-crest tsslab
Language:Python 1
dgavr / biotagging
Python scripts necessary to reproduce ATAC-seq and RNA-seq analysis in Biotagging manuscript
biotagging atac-seq strand-splitting rnaseq tsslab
Language:Perl 0
dgavr / Useful_small_scripts_for_DESeq2
Some useful scripts useful for parsing or writing DESeq2 Scripts
tsslab deseq2 annotate combinatorial r python
Language:Python 0
dgavr / Zebrafish_mappability
Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes
mappability repeats genome genome-browser alignability ngs gem bowtie tsslab zebrafish genome-annotation danio-rerio
Language:Python 0

dgavr / Single_Cell_Iterative_Pooling