dgavr's repositories
Single_Cell_Iterative_Pooling
Iteratively randomly pooling scRNA-seq expressing a given gene from different numbers of cells and running DESeq2 with fdrtools correction to determine how many times which genes come out as enriched with said gene
biotagging
Python scripts necessary to reproduce ATAC-seq and RNA-seq analysis in Biotagging manuscript
Language:Perl000
Language:Python000
Useful_small_scripts_for_DESeq2
Some useful scripts useful for parsing or writing DESeq2 Scripts
Language:Python000
Zebrafish_mappability
Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes