substitution-matrices

There are 0 repository under substitution-matrices topic.

• wrf / graphphylo

  visualization of phylogenetic output files

  phylogeneticsphylobayesrf-distancesubstitution-matricesvizualization
  Language:R 13

• zenodeapp / pairwise-alignments

  Solidity implementations of well-known pairwise alignment methods such as Needleman-Wunsch's global sequence alignment and the Smith-Waterman local sequence alignment algorithm.

  algorithmalignmentamino-acidsdnaneedleman-wunschnucleotidesproteinssmith-watermansubstitution-matricescontractssolidity
  Language:Solidity 3

• BorgwardtLab / GraphMatchingSubstitutionMatrices

  Code and Data for the paper: Structure- and Function-Aware Substitution Matrices via Learnable Graph Matching (RECOMB 2024 & ICML 2024 Differentiable Almost Everything Workshop)

  graph-matchingsubstitution-matricesrecomb2024icml-2024
  Language:Python 2

• zenodeapp / substitution-matrices

  A CRUD for substitution matrices like BLOSUM50, BLOSUM62, PAM250 and more; commonly used in Bioinformatics and Evolutionary Biology.

  bioinformaticscrudhardhatmatrixnucleotide-sequencesprotein-sequencessoliditysubstitution-matrices
  Language:Solidity 0