Warren Francis's repositories
genomeGTFtools
convert various features into a GFF-like file for use in genome browsers
graphphylo
visualization of phylogenetic output files
supermatrix
scripts to process, join, split, or add new proteins to a supermatrix alignment using hmms
lavaLampPlot
instructions, python and R code for generating lava lamp plots of kmer coverage
genome-size
examination of genome size across all kingdoms
misc-analyses
other analyses of diverse topics including food, demography, tourism, mapping, and more
heteropecilly
in depth analysis of heteropecillious sites in supermatrices
map_code_in_R
code for map plotting
copy-exif-meta
automate copying of EXIF metadata from video to framegrabs
envbiogeo-mgap
information and code for course projects for the biogeochemical cycles class 2021
erc-success
analysis of success of ERC grant applications
euk-sterol-hopene
datasets for paper on evolution of sterol and hopene metabolism in eukaryotes
figure-gallery
gallery of problematic paper figures
foodbalance
analysis of global food balance
microbe-ethanol
examination of microbial tolerance to ethanol
neoproterozoic
figures and raw data on emergence of animals and the Tonian earth system
oceanography_scripts
oceanography code
taxonomy_database
frequency of high level ranks in sequence databases
wrf.github.io
personal website for WRF
yeast-genomics
some analyses on fungal genomes