strains

There are 0 repository under strains topic.

• liaoherui / StrainScan

  High-resolution strain-level microbiome composition analysis tool based on reference genomes and k-mers

  k-mersmetagenomicsreference-basedbacterial-genomesstrains
  Language:Python 32

• kevsilva / StrainFLAIR

  Strain-level abundances estimation in metagenomic samples using variation graphs

  metagenomicsvariation-graphspangenomestrains
  Language:Python 24

• gugarosa / leaflyer

  🍀 Scraps data from Leafly and collects amazing weed-based meta-data.

  rpaseleniumweb-scrappingleaflystrains
  Language:Python 21

• MineralsCloud / EquationsOfStateOfSolids.jl

  A Julia package for fitting the equation of state of solids, and more

  equation-of-statefitting-curvejulia-packagesolid-state-physicssolidssolvestrainsthermodynamic-properties
  Language:Julia 13

• zhixingfeng / iGDA

  Detect and phase minor SNVs from long-read sequencing data

  snvsoxford-nanoporepacbio-sequencingvariantsstrainsmetagenome-deconvolution
  Language:C++ 12

• gsiekaniec / ORI

  ORI (Oxford nanopore Reads Identification) is a software allowing, from long nanopore reads, to identify the bacterial strains present in a sample.

  strainsidentificationnanoporeclassificationhowdesbtspaced-seedlong-readsminionstrains-identificationoribacterial-strains
  Language:C++ 3

• raghavagps / FluSPred

  Prediction infectious strains of Influenza A virus for human

  genomeinfectious-diseasesinfluenzaprediction-modelproteinstrainsvirus
  Language:Python 3
• mMap

  PeltzLab-Stanford / mMap

  Computational tool for prioritizing the genetic candidates based on the protein functional and regulatory features

  genetic-candidatesmousevariantsphenotypepathwayssingle-cellstrains
  Language:Python 2