There are 2 repositories under stock-assessment topic.
FSA (Fisheries Stock Assessment) package provides R functions to conduct typical introductory fisheries analyses.
Gadget is the Globally applicable Area Disaggregated General Ecosystem Toolbox
More stock assessment methods for data-limited fisheries
FSAdata contains data for use in common fisheries stock analyses. See installation instructions further below.
This package helps fisheries scientists collect growth data from calcified structures and back-calculate estimated lengths at previous ages. The package is intended to replace much of the functionality provided by the now out-dated fishBC software.
Data-poor fish stock assessment using the single species, size structured, steady state model
Connecting single-stock assessment models through correlated survival
R :package: to download, cache and read in different versions of the RAM Legacy Stock Assessment Data Base, an online compilation of stock assessment results for commercially exploited marine populations from around the world.
The source code for GMACS
Repository for JABBA-Select
R package for modeling anadromous fish population responses to dams
R code and data required for whaler shark (Carcharhinus brachyurus) harvest model
A Management Strategy Evaluation (MSE) framework using FLBEIA and Gadget
Fisheries production dashboard
A repository to plan transition from the LAM to Lester models for Region 3 Lake Trout management.
Stock structure evaluation of the Pacific sleeper shark in Alaska waters
A management strategy evaluation (MSE) framework for persistent estimation bias in stock assessment
This repository mainly contains generic scripts to apply ensemble approach using delta-MVLN to SS3 stock assessment models.