alko989 / s6model

Data-poor fish stock assessment using the single species, size structured, steady state model

Single species, size structured, steady state (s6) fish stock assessment model

Stable version:

Development version:

Data-poor stock assessment using the s6model

Installation

s6 depends on the Template Model Builder (TMB)

Using `remotes' package:

## install.packages('remotes')
install.packages('TMB')
library(remotes)
## Stable version
install_github("alko989/s6model")
## Development version
install_github("alko989/s6model", ref = "dev")

Another option is to download the whole code as a zipball and build and install using R CMD INSTALL

References

Kokkalis, A., Thygesen, U. H., Nielsen, A. and Andersen, K. H. (2015) ‘Limits to the reliability of size-based fishing status estimation for data-poor stocks’, Fisheries Research, 171, pp. 4–11. doi: 10.1016/j.fishres.2014.10.007.

Kokkalis, A., Eikeset, A. M., Thygesen, U. H., Steingrund, P. and Andersen, K. H. (2016) ‘Estimating uncertainty of data limited stock assessments’, ICES Journal of Marine Science: Journal du Conseil, In Press. doi: 10.1093/icesjms/fsw145.