snv-annotation

There are 0 repository under snv-annotation topic.

waqasuddinkhan / MACARON-GenMed-LabEx
Multi-bAse Codon-Associated variant Re-annotatiON (MACARON)
macaron snpcluster pcsnv snv-annotation snp codon annotator annotation-framework vcf snpeff gatk snv variants python github
Language:Python 7
ICGC-TCGA-PanCancer / OxoG-Dockstore-Tools
A CWL version of the Seqware OxoG workflow. This repository also contains scripts and dockerfiles used by the stand-alone versions of these components.
cwl indel-annotation minibam oxog-filtering pcawg snv-annotation
Language:Shell 4
ICGC-TCGA-PanCancer / pcawg-snv-indel-annotation
This workflow performs annotation on SNV and INDEL VCFs.
pcawg snv-annotation indel-annotation cwl cwl-workflow
Language:JavaScript 4
nickveltmaat / SNVcaller
Pipeline to call SNV's with 4 tools (VarDict, LoFreq, Mutect2 & SiNVICT)
somatic-variants somatic-mutations snvs snv snv-annotation cell-free-dna ctdna cfdna lofreq mutect2 vardict sinvict indel
Language:Python 3
ghga-de / nf-snvcalling
a Nextflow SNV calling and annotation pipeline based on DKFZ-ODCF/SNVCallingWorkflow
dkfz ghga odcf snv snv-annotation snv-call somatic-mutations somatic-variants
Language:Python 1

waqasuddinkhan / MACARON-GenMed-LabEx