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Collecting Genotypes from ENA and make their SNPs
Calling SNPs using UNEAK (de novo) pipeline for ponderosa pine
Nextflow pipeline for GATK best practices (HaplotypeCaller)
Security & performance assessment on client-server schemes that perform genomic sequence analysis using different encryption methods
This repository contains a Python script that queries NCBI to retrieve detailed information about SNPs (Single Nucleotide Polymorphisms) and parses the returned data. The script makes a request to the NCBI API, parses the XML data, and organizes the information into tables using pandas.
O GetVar é útil para o auxílio a diagnósticos genéticos e aconselhamentos, permitindo decisões baseadas em dados com respaldo científico, otimizando tempo e servindo de suporte ao sistema de decisão clínico.