protein-prediction

There are 1 repository under protein-prediction topic.

bio_embeddings
sacdallago / bio_embeddings
Get protein embeddings from protein sequences
sequence-embeddings pipeline embedders bio-embeddings protein-sequences machine-learning language-model protein-structure protein-prediction
Language:HTML 438
LucaAngioloni / ProteinSecondaryStructure-CNN
Protein Secondary Structure predictor using Convolutional Neural Networks
structure-prediction protein-prediction cnn chain machine-learning deep-learning protein-structure keras pdb cullpdb
Language:Python 108
breimanntools / aaanalysis
Python framework for interpretable protein prediction
explainability feature-engineering feature-selection intepretable-machine-learning intrepretability machine-learning positive-unlabeled-learning protein-prediction
Language:Jupyter Notebook 27
BernhoferM / TMbed
Transmembrane proteins predicted through Language Model embeddings
bioinformatics deep-learning machine-learning protein-embeddings protein-prediction pytorch transmembrane-proteins
Language:Python 24
zhouzilu / cTPnet
cTPnet Package
ctp-net deep-neural-networks protein-prediction scrna-seq surface-protein-imputation
Language:Python 23
jahnl / binding_in_disorder
Prediction of Binding Residues in Disordered Regions Based on Protein Embeddings; TUM Master Praktikum Bioinformatics 2022 (Project #3) and Master's Thesis
bioinformatics deep-learning machine-learning binding-sites protein-prediction
Language:Python 5
mainpyp / cls-protein-prediction
Code and results for the practical exercises of the course "Protein Prediction 2" in Winter 21/22 at TUM Authors: Adrian Henkel, Finn Gaida, Lis Arend, Sebastian Dötsch, Shlomo Libo Feigin
deep-learning protein-prediction
Language:Jupyter Notebook 4
prajuktadey / Protein-Function-Prediction
gnn-model graph-convolutional-networks protein-prediction
Language:Jupyter Notebook 1
grace-raper / markov-protein-prediction
Utilizes Markov Models to predict protein coding genes
computational-biology dna-sequences java machine-learning markov-model matlab protein-prediction
Language:MATLAB 0
HNOX_Pred
JasonJiangs / HNOX_Pred
HNOXPred: a web tool for the prediction of gas sensing H-NOX proteins from amino acid sequence
flask bioinformatics-algorithms mysql javascript python protein-prediction webserver
Language:JavaScript 0
kiwi2kiwi / Phosphorylation_prediction
Predicting phosphorylation sites from sequence and structure via a GNN
bioinformatics graph-neural-network machine-learning protein-prediction
Language:Python 0
mathieubolteau / GLOG-Project
Repository for the software engineering project during the second year of the Master of Bioinformatics at the University of Bordeaux.
bioinformatics python3 html-css-javascript protein-prediction 3d-visualization 2d-visualization flask-server web-development bordeaux-university
Language:JavaScript 0
Rostlab / bio_embeddings
Repository containing bio_embeddings resources
protein-embeddings protein-structure protein-prediction bioinformatics
0
Rostlab / TMbed
Transmembrane proteins predicted through Language Model embeddings
bioinformatics deep-learning machine-learning protein-embeddings protein-prediction pytorch transmembrane-proteins
0