markovian-dynamics

There are 1 repository under markovian-dynamics topic.

danieljsharpe / DISCOTRESS
🦜 DISCOTRESS 🦜 is a software package to simulate and analyse the dynamics on arbitrary Markov chains
continuous-time-markov-chain ctmc dtmc enhanced-sampling k-shortest-paths kinetic-monte-carlo markov-chain markov-chains markov-model markov-process markovian-dynamics network-dynamics random-walk rare-events simulation simulation-algorithms stochastic-processes stochastic-simulation stochastic-simulation-algorithm
Language:C++ 24
Edric-Matwiejew / QSW_MPI
QSW_MPI is a python package developed for MPI-parallelised time-series simulation of continuous-time quantum stochastic walks. This model allows for the study of Markovian open quantum systems in the Lindblad formalism, including a generalization of the continuous-time random walk and continuous-time quantum walk.
quantum-stochastic-walk open-quantum-walk markovian-dynamics lindblad-master-equation parallel-computation fortran mpi python quantum-walk matrix-exponentiation
Language:Fortran 8
danieljsharpe / DISCOTRESS_tutorials
Learn to get started using DISCOTRESS with these tutorials! Then apply to your own Markov chains in ecology 🦜🌴 economics 💸📈 biophysics 🧬🦠 and more!
ctmc discrete-event-simulation dtmc kinetic-monte-carlo markov-chain markov-decision-process markov-decision-processes markov-model markov-process markovian-dynamics network-dynamics random-walk rare-events simulation stochastic-dynamics stochastic-simulation stochastic-simulation-algorithm tutorials
Language:Brainfuck 4
amitg7 / markovian-dynamics
Markovian-dynamics is a Python package built to simplify dynamics calculations in thermodynamic systems.
markovian-dynamics physics rate-matrix master-equation non-equilibrium detailed-balance arrhenius-process thermodynamics
Language:Python 2
danieljsharpe / DISCOTRESS_tools
Various scripts for analysis of the dynamics on Markov chains, and processing DISCOTRESS output
continuous-time-markov-chain continuous-time-random-walk discrete-state-stochastic-processes markov-chain markov-model markovian-dynamics network-dynamics stochastic-processes
Language:Python 1
danieljsharpe / k_distinct_paths
Python code to find the k shortest paths in a kinetic network (Markov chain)
k-shortest-paths markov-model markovian-dynamics shortest-paths
Language:Python 0