stochastic-dynamics

There are 1 repository under stochastic-dynamics topic.

PyGromosTools
rinikerlab / PyGromosTools
This package is a python library with tools for the Molecular Simulation - Software Gromos. It allows you to easily set up, manage and analyze simulations in python.
api computational-chemistry energy-minimization gromos md molecular-dynamics openforcefield protein-simulations python rdkit simulation stochastic-dynamics wrapper
Language:Python 16
danieljsharpe / DISCOTRESS_tutorials
Learn to get started using DISCOTRESS with these tutorials! Then apply to your own Markov chains in ecology 🦜🌴 economics 💸📈 biophysics 🧬🦠 and more!
markov-chain tutorials markov-process stochastic-simulation discrete-event-simulation kinetic-monte-carlo network-dynamics rare-events markov-model random-walk markovian-dynamics dtmc ctmc markov-decision-processes markov-decision-process simulation stochastic-simulation-algorithm stochastic-dynamics
Language:Brainfuck 5
RandBar
americocunhajr / RandBar
RandBar is a Matlab code to simulate the nonlinear stochastic dynamics of a bar structural system with attached discrete elements.
nonlinear-dynamics structural-dynamics uncertainty-quantification matlab monte-carlo-simulation dynamical-systems stochastic-dynamics
Language:MATLAB 4
stecrotti / MatrixProductBP.jl
Matrix Product Belief Propagation
bayesian-inference belief-propagation matrix-product-states stochastic-dynamics
Language:Julia 4
MrVPlusOne / STEADY
Simultaneous State Estimation and Dynamics Learning from Indirect Observations.
expectation-maximization-algorithm machine-learning particle-filters probabilistic-inference stochastic-dynamics
Language:Julia 3
ORCHARD
americocunhajr / ORCHARD
ORCHARD is a Matlab code for simulation and visualization of the nonlinear dynamics of an orchard sprayer tower.
computational-mechanics computational-physics dynamical-systems monte-carlo-simulation nonlinear-dynamics stochastic-dynamics structural-dynamics uncertainty-quantification
Language:MATLAB 1