There are 2 repositories under continuous-time-markov-chain topic.
🦜 DISCOTRESS 🦜 is a software package to simulate and analyse the dynamics on arbitrary Markov chains
This R package simulates data from a latent class CTMC model
Modeling the co-evolution of viral spreading and structural stability in signed networks
Various scripts for analysis of the dynamics on Markov chains, and processing DISCOTRESS output
Some slides, code and videos about R, mostly for mathematical modellers
Dynamic server allocation for energy efficiency using stochastic modeling techniques