exome-pipeline

There are 0 repository under exome-pipeline topic.

ESR-NZ / human_genomics_pipeline
A Snakemake workflow to process single samples or cohorts of Illumina paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4/parabricks.
pipeline genomics nvidia-clara-parabricks nvidia-gpu snakemake-pipeline gatk4 gatk-bestpractices illumina exome-pipeline cohort-analysis
Language:Python 29
SciLifeLab / NGI-ExoSeq
This pipeline has moved! Please see:
exome-sequencing exome-pipeline bioinformatics-pipeline bioinformatics-analysis nextflow
Language:Groovy 8
Bohdan-Khomtchouk / NGStoolkit
One-stop shop for one-click NGS analyses from the command-line
bash bash-script bioinformatics chip-seq computational-biology exome-pipeline methyl-seq next-generation-sequencing ngs rna-seq-analysis shell-script
Language:Shell 3
drveera / exomepipe
A pipeline for variant calling of Exome using GATK best practice workflow
bioinformatics-pipeline exome-pipeline gatk
Language:Makefile 1
lucianhu / Masterarbeit
Leveraging WES short reads for PAN-EXOME creation and analysis.
exome exome-pipeline exome-sequencing ngs ngs-analysis ngs-pipeline pangenome pangenome-graph pangenome-pipeline pangenomic-analysis
Language:WDL 0