Quynh Nhu Nguyen's repositories
funcscan
(Meta-)genome screening for functional and natural product gene sequences
mag
Assembly and binning of metagenomes
hpc-starter-guide
Access beginner-friendly tutorials on SSH for secure remote access and SLURM for job scheduling and management.
Masterarbeit
Leveraging WES short reads for PAN-EXOME creation and analysis.
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Bash-script-DNA-Sequence
Linux command-line to analyse next-generation sequencing (NGS) data
DNA-Methylation-Assessment
Applying R and Bioconductor to assess DNA Methylation
PROtein-binDIng-enerGY-predicts-antibody-antigen-interaction-interfaces
Characterizing antibody-antigen interaction interfaces
crop_gdd_python
Applying Python to calculate plot GDD, accumulated GDD and daylength
prodigy-lig
Prediction of Protein-Small molecule binding affinities
prodigy
Repository containing various scripts to predict the binding affinity of protein-protein complexes from structure