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Evaluation framework for computationally inferred gene networks from single-cell data.
Identify transcription factor-enhancer/promoter-gene network from run-on sequencing data
An R package designed to integrate and visualize various levels of epigenomic information, including but not limited to: ChIP, Histone, ATAC, and RNA sequencing. epiRomics is also designed to identify enhancer and enhanceosome regions from these data.