cutandtag

There are 0 repository under cutandtag topic.

nf-core / cutandrun
Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.
nf-core nextflow workflow pipeline cutandrun-seq cutandrun cutandtag-seq cutandtag
Language:Nextflow 65
adityamahadevaniyer / Cut-and-Tag
Slurm scripts for analyzing bulk Cutandtag data
cutandtag bowtie2 deeptools fastqc trimmomatic picard slurm
Language:Shell 0
sebastian-gregoricchio / Rseb
An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.
ngs chip-seq datamining bedtools deeptools daily-tasks rna-seq atac-seq r qpcr qpcr-analysis cutandtag data-visualisation data-visualization genomics statistics
Language:R 0
stjude-biohackathon / peakPeekeR
Peak calling optimization via real time results assessment and interactive parameter adjustment.
atac-seq chip-seq cutandrun cutandtag genrich macs macs2 peak-calling shiny peak-callers sicer2
Language:R 0

nf-core / cutandrun