chromhmm

There are 0 repository under chromhmm topic.

• meuleman / epilogos

  Methods for summarizing and visualizing multi-biosample functional genomic annotations

  epigenomicschromatinchromhmmcompbiodataviz
  Language:Python 40

• crazyhottommy / pyflow-chromForest

  snakemake workflow for random forest based feature selection on chromHMM data

  snakemake-workflowschromhmmepigenomicsmachine-learning
  Language:Python 3

• MahShaaban / segmenter

  Perform Chromatin Segmentation Analysis in R by Calling ChromHMM

  chromhmmbioconductorsegmentation-an
  Language:R 3

• miamib34ch / HSE-Bioinformatics

  Practical and home works in the discipline Bioinformatics.

  bioinformaticschromhmmgene-predictiongenetic-map-visualizationgenome-analysisgenome-annotationgenome-assemblyhi-chistone-modificationsmethylation-analysisphylogenetic-treespythonquadruplexesrna-seq-analysissequence-alignmentsingle-cell-rna-seqsnps
  Language:HTML 1

• sof202 / ChromOptimise

  Find the optimum number of states to use in a ChromHMM model

  bashchromhmmoptimisationoptimizationrobustnessrshell
  Language:Shell 1

• amitjavilaventura / chromHMMviewR

  Package with functions to plot the data coming from the ChromHMM LearnModel function.

  chromhmmr
  Language:R 0