MahShaaban

pcr

Quality assessing, analyzing and testing the statistical significance of real-time quantitative PCR data

intro_data_r

A gentle introduction to data analysis in R

segmenter

Perform Chromatin Segmentation Analysis in R by Calling ChromHMM

IntegratingDataBioc

Source code for the Bioconductor workshop "Integrating gene expression and DNA-binding data using R/Bioconductor"

targetShop

Source code for the Bioconductor workshop "IIntegrating ChIP-seq and RNA-seq data in R"

chromhmmData

chromhmmData: Chromosome Size, Coordinates and Anchor Files

target_pkg_talk

Code for "target: An R package to Predict Combined Function of Transcription Factors" short talk. BioC Asia 2020.

BuildABiocWorkshop

Template for building a bioconductor workshop package using github actions

cars

a web application for renting cars

changer

Change R Package Name

chromatin_segmentation_r

Package demo slides, "Chromatin Segmentation Analysis in R"

ChromHMM

intro_meta_r

Introduction to meta analysis in R

latex_overleaf

An introduction to the basics of LaTeX using Overleaf

learnr

Interactive Tutorials with R Markdown

MPRA-design-tool

An R script which takes genetic variants and designs probes for massively parallel reporter assays.

NPA

Network Perturbation Amplitude

NPAModels

R package and data for NPA models

openreviewer

Query openreview API from R

orlistat_meta_analysis

A training program for medical students on evaluating clinical evidence funded by the National Health Insurance Service in Korea

rebeta

sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

segmenterNote

A technical note to describe the segmenter package

segmentrShop

stat_rethinking_2022

Statistical Rethinking course winter 2022

target_talk

Code for "Integrating binding and expression data to predict transcription factors combined function" talk. KSBMB, Seoul, 2020

targetFlow

target: An R Package to Predict Combined Function of Transcription Factors (workflow article)

test-nf

TRAPD

Burden testing against public controls

VinczeEtal2021Nature