cell-fate-determination

There are 0 repository under cell-fate-determination topic.

cellrank
theislab / cellrank
CellRank: dynamics from multi-view single-cell data
machine-learning single-cell-rna-seq bioinformatics rna-velocity markov-chains genetics data-science fuzzy-clustering-analyses manifold-learning single-cell-genomics trajectory-generation cell-fate-transitions cell-fate-determination
Language:Python 372
vanheeringen-lab / ANANSE
Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed installation instructions and usage examples.
bioinformatics cell-fate-determination enhancer-database grn key-transcription-factors
Language:Python 82
pyrovelocity
pinellolab / pyrovelocity
𝒫robabilistic modeling of RNA velocity ⬱
cell-fate-determination deep-generative-model developmental-trajectories multiomics probabilistic-models probabilistic-programming rna-velocity rna-velocity-estimation single-cell-genomics single-cell-rna-seq transcriptomics rna-splicing rna-splicing-analysis single-cell-multiomics pyro
Language:Python 47
WWXkenmo / NetID_package
A scalable method to infer fate specific gene regulatory network from single cell gene expression data
cell-fate-determination gene-regulatory-network single-cell-rna-seq trajectory-analysis
Language:R 9
Lan-lab / CIBER
CIBER is a causal inference framework for cell fate analysis
causal-inference cell-fate-determination cell-state
Language:HTML 2
Heinyxiao / MetaMorphCells
The study of how cancer cells gain stemness.
bioinformatics cell-fate-determination oncology single-cell-analysis
Language:Jupyter Notebook 0