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A review of papers proposing novel GNN methods with application to brain connectivity published in 2017-2020.
The Ontology for Nutritional Studies (ONS) has been developed as part of the ENPADASI European project (http://www.enpadasi.eu/) with the aim to define a common language and building ontologies for nutritional studies.
Microbial marker identification from cross-cohort datasets
A poster showing TIGS project at BioForum2019, ShanghaiTech University
My Solution for PrecisionFDA Brain Cancer Predictive Modeling and Biomarker Discovery Challenge
A package for biomarker selection based on multiset multicover and the cross-entropy-method.
I extracted the tumor features according to the data annotation of all four stages of 3D MRI data. And I deployed Graph Neural Networks based on important features such as First Order Statistics, Shape-based (3D), Shape-based (2D), GLCM, GLRLM, GLSZN, NGTDM, and GLDM.
:microscope: R/biotmle: A package for biomarker discovery combining targeted minimum loss-based estimation with empirical Bayes moderation