Wellcome Sanger Institute - PSD

sequencescape

Web based LIMS

crawler

Store sample data from Lighthouse labs

traction-service

Ruby on Rails exposing a RESTful API for a Long Read LIMS

asset_audits

Add audits to assets in sequencescape

labwhere

A tool for tracking uniquely barcoded labware

limber

A flexible lims extension of the old app

lighthouse

API to search through data provided by Lighthouse Labs

mixtio

print_my_barcode

Barcode printing service

quanthub

Provides parsing and visualisation of the concentration information from qPCR and plate readers

traction-ui

unified_warehouse

baracoda

Generate barcodes on demand

sm_workflow_lims

A small LIMS to assist with managing workflows

stan-client

Front-end code for the Spatial Genomics LIMS

.github

Default community health files for Sanger

cherrytrack

event_warehouse

A simple message queue driven event store

gatekeeper

Gatekeeper is used to track the production and validation of batches of tag plates for sequencing. It is designed to interface with the Sequencescape LIMS.

General-Backlog-Items

Broad bucket to collate backlog items that have no obvious repository

janitor

A Python application which hosts task scripts for data management and clean up tasks, running them on a schedule.

lab-share-lib

Python library to interact with lab-share framework

lighthouse-ui-v3

V3 front end for lighthouse API

record_loader

Easily manage seeding and updating data from simple yml files

sample-tracking

Sample Tracking Report

samples_extraction

stan-core

tol-lab-share

Rabbitmq consumer for TOL data input

warren

Gem to handle rabbitMQ integrations

wrangler

A microservice to deal with tube racks